The species Severe acute respiratory syndrome-related coronavirus: classifying 2019-nCoV and naming it SARS-CoV-2

Publication date

2020

Authors

Gorbalenya, Alexander
Baker, Susan
Baric, Ralph
de Groot, RaoulISNI 0000000397145355
Drosten, Christian
Gulyaeva, Anastasia
Haagmans, Bart
Lauber, Chris
Leontovich, Andrey
Neuman, Benjamin

Editors

Advisors

Supervisors

Document Type

Article
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License

cc_by

Abstract

The present outbreak of lower respiratory tract infections, including respiratory distress syndrome, is the third spillover, in only two decades, of an animal coronavirus to humans resulting in a major epidemic. Here, the Coronavirus Study Group (CSG) of the International Committee on Taxonomy of Viruses, which is responsible for developing the official classification of viruses and taxa naming (taxonomy) of the Coronaviridae family, assessed the novelty of the human pathogen tentatively named 2019-nCoV. Based on phylogeny, taxonomy and established practice, the CSG formally recognizes this virus as a sister to severe acute respiratory syndrome coronaviruses (SARS-CoVs) of the species Severe acute respiratory syndrome-related coronavirus and designates it as severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2). To facilitate communication, the CSG further proposes to use the following naming convention for individual isolates: SARS-CoV-2/Isolate/Host/Date/Location. The spectrum of clinical manifestations associated with SARS-CoV-2 infections in humans remains to be determined. The independent zoonotic transmission of SARS-CoV and SARS-CoV-2 highlights the need for studying the entire (virus) species to complement research focused on individual pathogenic viruses of immediate significance. This research will improve our understanding of virus-host interactions in an ever-changing environment and enhance our preparedness for future outbreaks.

Keywords

Coronaviruses, comparative genomics, virus evolution, nomenclature, phylogenomics, respiratory distress syndrome, species, taxonomy, virus, zoonosis, SDG 3 - Good Health and Well-being

Citation

Gorbalenya, A, Baker, S, Baric, R, de Groot, R, Drosten, C, Gulyaeva, A, Haagmans, B, Lauber, C, Leontovich, A, Neuman, B, Penzar, D, Perlman, S, Poon, L, Samborskiy, D, Sidorov, I, Sola, I & Ziebuhr, J 2020, 'The species Severe acute respiratory syndrome-related coronavirus: classifying 2019-nCoV and naming it SARS-CoV-2', Nature Reviews Microbiology, vol. 5, pp. 536–544. https://doi.org/10.1038/s41564-020-0695-z