Acquiring and Predicting Multidimensional Diffusion (MUDI) Data: An Open Challenge

Publication date

2020

Authors

Pizzolato, Marco
Palombo, Marco
Bonet-Carne, Elisenda
Tax, Chantal M W
Grussu, Francesco
Ianus, Andrada
Bogusz, Fabian
Pieciak, Tomasz
Ning, Lipeng
Larochelle, Hugo

Editors

Advisors

Supervisors

Document Type

Part of book

Collections

Open Access logo

License

taverne

Abstract

In magnetic resonance imaging (MRI), the image contrast is the result of the subtle interaction between the physicochemical properties of the imaged living tissue and the parameters used for image acquisition. By varying parameters such as the echo time (TE) and the inversion time (TI), it is possible to collect images that capture different expressions of this sophisticated interaction. Sensitization to diffusion-summarized by the b-value-constitutes yet another explorable “dimension” to modify the image contrast, which reflects the degree of dispersion of water in various directions within the tissue microstructure. The full exploration of this multidimensional acquisition parameter space offers the promise of a more comprehensive description of the living tissue but at the expense of lengthy MRI acquisitions, often unfeasible in clinical practice. The harnessing of multidimensional information passes through the use of intelligent sampling strategies for reducing the amount of images to acquire, and the design of methods for exploiting the redundancy in such information. This chapter reports the results of the MUDI challenge, comparing different strategies for predicting the acquired densely sampled multidimensional data from sub-sampled versions of it.

Keywords

Diffusion, MUDI, Quantitative imaging, Relaxation, Taverne, Modelling and Simulation, Geometry and Topology, Computer Graphics and Computer-Aided Design, Applied Mathematics

Citation

Pizzolato, M, Palombo, M, Bonet-Carne, E, Tax, C M W, Grussu, F, Ianus, A, Bogusz, F, Pieciak, T, Ning, L, Larochelle, H, Descoteaux, M, Chamberland, M, Blumberg, S B, Mertzanidou, T, Alexander, D C, Afzali, M, Aja-Fernández, S, Jones, D K, Westin, C F, Rathi, Y, Baete, S H, Cordero-Grande, L, Ladner, T, Slator, P J, Hajnal, J V, Thiran, J P, Price, A N, Sepehrband, F, Zhang, F & Hutter, J 2020, Acquiring and Predicting Multidimensional Diffusion (MUDI) Data : An Open Challenge. in Computational Diffusion MRI : MICCAI Workshop, Shenzhen, China, October 2019. Mathematics and Visualization, Springer Science and Business Media Deutschland GmbH, pp. 195-208. https://doi.org/10.1007/978-3-030-52893-5_17