Integrative Bioinformatics Approaches for Identification of Drug Targets in Hypertension

Publication date

2018

Authors

Hemerich, Daiane
van Setten, JessicaORCID 0000-0002-4934-7510ISNI 0000000390875734
Tragante Do O, V
Asselbergs, Folkert WORCID 0000-0002-1692-8669ISNI 0000000391548591

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Document Type

Article

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Abstract

High blood pressure or hypertension is an established risk factor for a myriad of cardiovascular diseases. Genome-wide association studies have successfully found over nine hundred loci that contribute to blood pressure. However, the mechanisms through which these loci contribute to disease are still relatively undetermined as less than 10% of hypertension-associated variants are located in coding regions. Phenotypic cell-type specificity analyses and expression quantitative trait loci show predominant vascular and cardiac tissue involvement for blood pressure-associated variants. Maps of chromosomal conformation and expression quantitative trait loci (eQTL) in critical tissues identified 2,424 genes interacting with blood pressure-associated loci, of which 517 are druggable. Integrating genome, regulome and transcriptome information in relevant cell-types could help to functionally annotate blood pressure associated loci and identify drug targets.

Keywords

GWAS, blood pressure, data integration, drug target identification, epigenetic regulation, functional annotation, hypertension

Citation

Hemerich, D, van Setten, J, Tragante, V & Asselbergs, F W 2018, 'Integrative Bioinformatics Approaches for Identification of Drug Targets in Hypertension', Frontiers in cardiovascular medicine, vol. 5, 25. https://doi.org/10.3389/fcvm.2018.00025