Automatic quantification of perivascular spaces in T2-weighted images at 7 T MRI

Publication date

2022-04-13

Authors

Verbeek-Spijkerman, Jolanda
Zwanenburg, Jaco J MORCID 0000-0002-4282-5719
Bouvy, Willem H.
Geerlings, M.ORCID 0000-0002-4037-036XISNI 0000000391005079
Biessels, Geert JanISNI 0000000117928938
Hendrikse, JeroenISNI 0000000390964171
Luijten, Peter R.ORCID 0000-0002-8040-8449ISNI 0000000397136870
Kuijf, Hugo J.ORCID 0000-0001-6997-9059ISNI 0000000393308567

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Abstract

Perivascular spaces (PVS) are believed to be involved in brain waste disposal. PVS are associated with cerebral small vessel disease. At higher field strengths more PVS can be observed, challenging manual assessment. We developed a method to automatically detect and quantify PVS. A machine learning approach identified PVS in an automatically positioned ROI in the centrum semiovale (CSO), based on -resolution T2-weighted TSE scans. Next, 3D PVS tracking was performed in 50 subjects (mean age 62.9 years (range 27–78), 19 male), and quantitative measures were extracted. Maps of PVS density, length, and tortuosity were created. Manual PVS annotations were available to train and validate the automatic method. Good correlation was found between the automatic and manual PVS count: ICC (absolute/consistency) is 0.64/0.75, and Dice similarity coefficient (DSC) is 0.61. The automatic method counts fewer PVS than the manual count, because it ignores the smallest PVS (length <2 mm). For 20 subjects manual PVS annotations of a second observer were available. Compared with the correlation between the automatic and manual PVS, higher inter-observer ICC was observed (0.85/0.88), but DSC was lower (0.49 in 4 persons). Longer PVS are observed posterior in the CSO compared with anterior in the CSO. Higher PVS tortuosity are observed in the center of the CSO compared with the periphery of the CSO. Our fully automatic method can detect PVS in a 2D slab in the CSO, and extract quantitative PVS parameters by performing 3D tracking. This method enables automated quantitative analysis of PVS.

Keywords

7 tesla MRI, Centrum semiovale, Machine learning, Perivascular spaces, Quantification, Behavioral Neuroscience, Cognitive Neuroscience, Biological Psychiatry, Neurology, Clinical Neurology, Journal Article

Citation

Verbeek-Spijkerman, J, Zwanenburg, J J M, Bouvy, W H, Geerlings, M I, Biessels, G J, Hendrikse, J, Luijten, P R & Kuijf, H J 2022, 'Automatic quantification of perivascular spaces in T2-weighted images at 7 T MRI', Cerebral circulation, cognition and behavior, vol. 3, 100142, pp. 1-9. https://doi.org/10.1016/j.cccb.2022.100142