Automatic classification of pulmonary peri-fissural nodules in computed tomography using an ensemble of 2D views and a convolutional neural network out-of-the-box

Publication date

2015-12

Authors

Ciompi, Francesco
de Hoop, Bartjan
van Riel, Sarah J
Chung, Kaman
Scholten, Ernst Th
Oudkerk, Matthijs
de Jong, Pim AORCID 0000-0003-4840-6854ISNI 0000000395539334
Prokop, Mathias
van Ginneken, BramISNI 0000000140776987

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Advisors

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Document Type

Article

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License

taverne

Abstract

In this paper, we tackle the problem of automatic classification of pulmonary peri-fissural nodules (PFNs). The classification problem is formulated as a machine learning approach, where detected nodule candidates are classified as PFNs or non-PFNs. Supervised learning is used, where a classifier is trained to label the detected nodule. The classification of the nodule in 3D is formulated as an ensemble of classifiers trained to recognize PFNs based on 2D views of the nodule. In order to describe nodule morphology in 2D views, we use the output of a pre-trained convolutional neural network known as OverFeat. We compare our approach with a recently presented descriptor of pulmonary nodule morphology, namely Bag of Frequencies, and illustrate the advantages offered by the two strategies, achieving performance of AUC = 0.868, which is close to the one of human experts.

Keywords

Chest CT, Peri-fissural nodules, Lung cancer screening, Convolutional neural networks, OverFeat, Deep learning, Taverne, Journal Article, Research Support, Non-U.S. Gov't

Citation

Ciompi, F, de Hoop, B, van Riel, S J, Chung, K, Scholten, E T, Oudkerk, M, de Jong, P A, Prokop, M & van Ginneken, B 2015, 'Automatic classification of pulmonary peri-fissural nodules in computed tomography using an ensemble of 2D views and a convolutional neural network out-of-the-box', Medical Image Analysis, vol. 26, no. 1, pp. 195-202. https://doi.org/10.1016/j.media.2015.08.001