Estimating average cellular turnover from BrdU measurements
Publication date
2003
Authors
Boer, R.J. de
Mohri, H.
Ho, D.D.
Perelson, A.S.
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Supervisors
Document Type
Article in proceedings
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Abstract
Cellular turnover rates in the immune system can be determined by labelling dividing cells with 5-bromo-
29-deoxyuridine (BrdU) or deuterated glucose (
²H-glucose). To estimate the turnover rate from such
measurements one has to fit a particular mathematical model to the data. The biological assumptions
underlying various models developed for this purpose are controversial. Here, we fit a series of different
models to BrdU data on CD4⁺ T cells from SIV⁻ and SIV⁺ rhesus macaques. We first show that the
parameter estimates obtained using these models depend strongly on the details of the model. To resolve
this lack of generality we introduce a new parameter for each model, the ‘average turnover rate’, defined
as the cellular death rate averaged over all subpopulations in the model. We show that very different
models yield similar estimates of the average turnover rate, i.e. ca. 1% day⁻¹ in uninfected monkeys and
ca. 2% day⁻¹ in SIV-infected monkeys. Thus, we show that one can use BrdU data from a possibly
heterogeneous population of cells to estimate the average turnover rate of that population in a robust manner.
5-bromo-29-deoxyuridine
parameter fitting
labelling
T lymphocyte
5-bromo-29-deoxyuridine
parameter fitting
labelling
T lymphocyte
Keywords
cellular proliferation, AIDS