Seeing More by Showing Less: Orientation-Dependent Transparency Rendering for Fiber Tractography Visualization

Publication date

2015-10-07

Authors

Tax, Chantal M W
Chamberland, Maxime
van Stralen, MORCID 0000-0002-3051-5000ISNI 0000000395962765
Viergever, MaxORCID 0000-0003-2582-042XISNI 0000000117491940
Whittingstall, Kevin
Fortin, David
Descoteaux, Maxime
Leemans, AlexanderORCID 0000-0002-9306-6126ISNI 0000000394149633

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Abstract

Fiber tractography plays an important role in exploring the architectural organization of fiber trajectories, both in fundamental neuroscience and in clinical applications. With the advent of diffusion MRI (dMRI) approaches that can also model "crossing fibers", the complexity of the fiber network as reconstructed with tractography has increased tremendously. Many pathways interdigitate and overlap, which hampers an unequivocal 3D visualization of the network and impedes an efficient study of its organization. We propose a novel fiber tractography visualization approach that interactively and selectively adapts the transparency rendering of fiber trajectories as a function of their orientation to enhance the visibility of the spatial context. More specifically, pathways that are oriented (locally or globally) along a user-specified opacity axis can be made more transparent or opaque. This substantially improves the 3D visualization of the fiber network and the exploration of tissue configurations that would otherwise be largely covered by other pathways. We present examples of fiber bundle extraction and neurosurgical planning cases where the added benefit of our new visualization scheme is demonstrated over conventional fiber visualization approaches.

Keywords

HUMAN CONNECTOME PROJECT, DIFFUSION TENSOR MRI, SPHERICAL DECONVOLUTION, BRAIN, TRACKING, NETWORK, Journal Article, Research Support, Non-U.S. Gov't

Citation

Tax, C M W, Chamberland, M, van Stralen, M, Viergever, M A, Whittingstall, K, Fortin, D, Descoteaux, M & Leemans, A 2015, 'Seeing More by Showing Less : Orientation-Dependent Transparency Rendering for Fiber Tractography Visualization', PLoS ONE [E], vol. 10, no. 10, e0139434. https://doi.org/10.1371/journal.pone.0139434