Microscopic memories: Visualizing plasticity of synaptic nanoscale organization

Publication date

2026-01-12

Authors

Droogers, W JISNI 0000000459096502

Editors

Advisors

Supervisors

Macgillavry, Harold D.ISNI 0000000390498692
Kapitein, Lukas C.ISNI 0000000389218112

Document Type

Dissertation
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License

cc_by

Abstract

The brain makes lasting memories by strengthening neuronal connections. This process is called synaptic plasticity. During synaptic plasticity, receptors are anchored in the synapse to strengthen the signal transmission between neurons. However, the receptors need to be within a couple of nanometers from the signal to be activated. Therefore, receptor placement inside the synapse determines the strength of signal transmission. The precise location of receptors inside synapses can be visualized using single-molecule localization microscopy. This technique is highly sensitive to artefacts and requires genetic labeling of receptors. In this thesis, we have improved the usability of existing genetic labeling techniques and extended their function to label multiple proteins at once. Using genetic labeling and single-molecule microscopy, we found that receptors and their scaffolding proteins reorganize into dense nanoscale clusters during synaptic plasticity. Furthermore, we showed that interactions between scaffolding proteins and the cytoskeleton are required for this nanoscale reorganization. The cytoskeleton supports the structure of synapses and increases their size during synaptic plasticity. Future research will try to elucidate how the cytoskeleton can reorganize the synapse and what other proteins are involved in this process. Auxiliary proteins of the receptors also influence the location of receptors in the synapse. We observed nanoclusters of auxiliary proteins in synapses. However, we did not identify what specific auxiliary protein is required for the nanoscale positioning of receptors during synaptic plasticity. All in all, this thesis has revealed that the cytoskeleton and scaffolding proteins guide the nanoscale reorganization of receptors during synaptic plasticity.

Keywords

Synaptische plasticiteit, Nanoschaal organisatie, Postsynaptisch membraan, Super-resolutie microscopie, Genetische modificatie, AMPA receptoren, Glutamaterge synapse, Synaptic plasticity, nanoscale organization, postsynaptic density, Super-resolution microscopy, Gene editing, CRISPR-Cas9, AMPA receptors, Excitatory synapse

Citation

Droogers, W 2026, 'Microscopic memories: Visualizing plasticity of synaptic nanoscale organization', Doctor of Philosophy, Universiteit Utrecht, Utrecht. https://doi.org/10.33540/3232