Amortized Normalizing Flows for Transcranial Ultrasound with Uncertainty Quantification
Publication date
2023
Authors
Orozco, Rafael
Louboutin, Mathias
Siahkoohi, Ali
Rizzuti, Gabrio
van Leeuwen, Tristan
Herrmann, Felix
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DOI
Document Type
Contribution to conference
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Abstract
We present a novel approach to transcranial ultrasound computed tomography that utilizes normalizing flows to improve the speed of imaging and provide Bayesian uncertainty quantification. Our method combines physics-informed methods and data-driven methods to accelerate the reconstruction of the final image. We make use of a physics-informed summary statistic to incorporate the known ultrasound physics with the goal of compressing large incoming observations. This compression enables efficient training of the normalizing flow and standardizes the size of the data regardless of imaging configurations. The combinations of these methods results in fast uncertainty-aware image reconstruction that generalizes to a variety of transducer configurations. We evaluate our approach with in silico experiments and demonstrate that it can significantly improve the imaging speed while quantifying uncertainty. We validate the quality of our image reconstructions by comparing against the traditional physics-only method and also verify that our provided uncertainty is calibrated with the error.
Keywords
Bayesian Estimation, Invertible Networks, Machine Learning Hybrid, Medical Imaging, Physics, Uncertainty Quantification, Artificial Intelligence, Software, Control and Systems Engineering, Statistics and Probability
Citation
Orozco, R, Louboutin, M, Siahkoohi, A, Rizzuti, G, van Leeuwen, T & Herrmann, F 2023, 'Amortized Normalizing Flows for Transcranial Ultrasound with Uncertainty Quantification', Paper presented at 6th International Conference on Medical Imaging with Deep Learning, MIDL 2023, Nashville, United States, 10/07/23 - 12/07/23 pp. 332-349. < https://proceedings.mlr.press/v227/orozco24a.html >, conference