DisVis: Quantifying and visualizing accessible interaction space of distance-restrained biomolecular complexes
Files
Publication date
2015-10-01
Authors
Van Zundert, Gydo C P
Bonvin, Alexandre M J J
Editors
Advisors
Supervisors
Document Type
Article
Metadata
Show full item recordCollections
License
Abstract
Summary: We present DisVis, a Python package and command line tool to calculate the reduced accessible interaction space of distance-restrained binary protein complexes, allowing for direct visualization and quantification of the information content of the distance restraints. The approach is general and can also be used as a knowledge-based distance energy term in FFT-based docking directly during the sampling stage.
Keywords
Biochemistry, Molecular Biology, Computational Theory and Mathematics, Computer Science Applications, Computational Mathematics, Statistics and Probability
Citation
Van Zundert, G C P & Bonvin, A M J J 2015, 'DisVis : Quantifying and visualizing accessible interaction space of distance-restrained biomolecular complexes', Bioinformatics, vol. 31, no. 19, pp. 3222-3224. https://doi.org/10.1093/bioinformatics/btv333