Design and Implementation of the International Genetics and Translational Research in Transplantation Network

Publication date

2015-11

Authors

Asselbergs, Folkert WORCID 0000-0002-1692-8669ISNI 0000000391548591
van Setten, JessicaORCID 0000-0002-4934-7510ISNI 0000000390875734
de Jonge, NicolaasISNI 0000000393235003
Otten, Henny GORCID 0000-0002-6927-2683ISNI 0000000390788817
de Weger, Roel A.ISNI 0000000388752188
van de Graaf, E. A.ISNI 0000000393618434
Kluin, Jolanda
de Bakker, Paul I W
International Genetics & Translational Research in Transplantation Network (iGeneTRAiN)

Editors

Advisors

Supervisors

Document Type

Article

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Open Access logo

License

taverne

Abstract

BACKGROUND: Genetic association studies of transplantation outcomes have been hampered by small samples and highly complex multifactorial phenotypes, hindering investigations of the genetic architecture of a range of comorbidities which significantly impact graft and recipient life expectancy. We describe here the rationale and design of the International Genetics & Translational Research in Transplantation Network. The network comprises 22 studies to date, including 16494 transplant recipients and 11669 donors, of whom more than 5000 are of non-European ancestry, all of whom have existing genomewide genotype data sets. METHODS: We describe the rich genetic and phenotypic information available in this consortium comprising heart, kidney, liver, and lung transplant cohorts. RESULTS: We demonstrate significant power in International Genetics & Translational Research in Transplantation Network to detect main effect association signals across regions such as the MHC region as well as genomewide for transplant outcomes that span all solid organs, such as graft survival, acute rejection, new onset of diabetes after transplantation, and for delayed graft function in kidney only. CONCLUSIONS: This consortium is designed and statistically powered to deliver pioneering insights into the genetic architecture of transplant-related outcomes across a range of different solid-organ transplant studies. The study design allows a spectrum of analyses to be performed including recipient-only analyses, donor-recipient HLA mismatches with focus on loss-of-function variants and nonsynonymous single nucleotide polymorphisms.

Keywords

Cooperative Behavior, Databases, Genetic, Genetic Association Studies, Genetic Markers, Genetic Predisposition to Disease, Graft Rejection, Graft Survival, Humans, International Cooperation, Models, Organizational, Organ Transplantation, Phenotype, Polymorphism, Single Nucleotide, Research Design, Risk Factors, Sample Size, Translational Medical Research, Treatment Outcome, Taverne, Journal Article, Research Support, N.I.H., Extramural, Research Support, Non-U.S. Gov't

Citation

Asselbergs, F, van Setten, J, de Jonge, N, Otten, HG, de Weger, RA, van de Graaf, E A, Kluin, J, de Bakker, P I W & International Genetics & Translational Research in Transplantation Network (iGeneTRAiN) 2015, 'Design and Implementation of the International Genetics and Translational Research in Transplantation Network', Transplantation, vol. 99, no. 11, pp. 2401-12. https://doi.org/10.1097/TP.0000000000000913