Automated Contradiction Detection in Biomedical Literature

Publication date

2018-07-08

Authors

Seddik Tawfik, N.
Spruit, M.R.ISNI 0000000077172004

Editors

Perner, Petra

Advisors

Supervisors

Document Type

Part of book
Open Access logo

License

taverne

Abstract

Medical literature suffers from inconsistencies between reported findings that answer the same research question. This paper introduces an automated two-phase contradiction detection model that integrates semantic properties as input features to a Learning-to-Rank framework, to accurately identify key findings of a research article. It also relies on negation, antonyms and similarity measures to detect contradictions between findings. The proposed technique is implemented and tested on a publicly available contradiction corpus 259 manually annotated abstracts. The performance is compared based on recall, precision and F-measure. Experimental evaluations prove the utility of the model and its contribution to the contradiction classification and extraction task.

Keywords

Biomedical NLP, Answer selection, Contradiction detection, Information extraction, Text mining, Taverne

Citation

Seddik Tawfik, N & Spruit, M 2018, Automated Contradiction Detection in Biomedical Literature. in P Perner (ed.), Machine Learning and Data Mining in Pattern Recognition : 14th International Conference, MLDM 2018, New York, NY, USA, July 15-19, 2018, Proceedings, Part I. vol. 1, Lecture Notes in Computer Science , vol. 10934, Springer, Cham, pp. 138–148. https://doi.org/10.1007/978-3-319-96136-1_12