Natural Language Processing and Text Mining (Turning Unstructured Data into Structured)

Publication date

2023-11-05

Authors

Bagheri, AyoubORCID 0000-0001-6366-2173ISNI 0000000492835784
Giachanou, AnastasiaISNI 0000000506582045
Mosteiro Romero, PabloORCID 0000-0001-7231-2773ISNI 0000000493075828
Verberne, Suzan

Editors

Asselbergs, Folkert
Denaxas, Spiros
Oberski, Daniel
Moore, Jason

Advisors

Supervisors

Document Type

Part of book
Open Access logo

License

taverne

Abstract

The integration of natural language processing (NLP) and text mining techniques has emerged as a key approach to harnessing the potential of unstructured clinical text data. This chapter discusses the challenges posed by clinical narratives and explores the need to transform them into structured formats for improved data accessibility and analysis. The chapter navigates through key concepts, including text pre-processing, text classification, text clustering, topic modeling, and advances in language models and transformers. It highlights the dynamic interplay between these techniques and their applications in tasks ranging from disease classification to extraction of side effects. In addition, the chapter acknowledges the importance of addressing bias and ensuring model explainability in the context of clinical prediction systems. By providing a comprehensive overview, the chapter offers insights into the synergy of NLP and text mining techniques in shaping the future of biomedical AI, ultimately leading to safer, more efficient, and more informed healthcare decisions.

Keywords

Natural language processing, Text mining, Clinical text, Text pre-processing, Language models, Text classification, Text clustering, Topic modeling, Explainability, Bias detection, Clinical NLP, Taverne

Citation

Bagheri, A, Giachanou, A, Mosteiro Romero, P & Verberne, S 2023, Natural Language Processing and Text Mining (Turning Unstructured Data into Structured). in F Asselbergs, S Denaxas, D Oberski & J Moore (eds), Clinical Applications of Artificial Intelligence in Real-World Data. 1 edn, Springer, pp. 69-93. https://doi.org/10.1007/978-3-031-36678-9_5