A new metric enabling an exact hypergraph model for the communication volume in distributed-memory parallel applications

Publication date

2013-08

Authors

Fortmeier, O.
Bücker, H.M.
Fagginger Auer, B.O.ISNI 0000000390431738
Bisseling, Rob H.ISNI 0000000384208994

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Advisors

Supervisors

Document Type

Article
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Abstract

A hypergraph model for mapping applications with an all-neighbor communication pattern to distributed-memory computers is proposed, which originated in finite element triangulations. Rather than approximating the communication volume for linear algebra operations, this new model represents the communication volume exactly. To this end, a hypergraph partitioning problem is formulated where the objective function involves a new metric. This metric, the kðk 1Þ-metric, accurately models the communication volume for an all-neighbor communication pattern occurring in a concrete finite element application. It is a member of a more general class of metrics, which also contains more widely used metrics, such as the cut–net and the ðk 1Þ-metric. In addition, we develop a heuristic to minimize the communication volume in the new kðk 1Þ-metric. For the solution of several real-world finite element problems, experimental results based on this new heuristic demonstrate a small reduction in communication volume compared to a standard graph partitioner and do not show significant reductions in communication volume compared to a hypergraph partitioner using the common ðk 1Þ-metric. However, for this set of problems, the new approach does reduce actual communication times. As a by-product, we observe that it also tends to reduce the number of messages. Furthermore, the new approach dramatically reduces the communication volume for a set of sparse matrix problems that are more irregularly-structured than finite element problems.

Keywords

Hypergraph, Unstructured triangulation, Communication volume metric, Finite elements, Combinatorial scientific computing, Taverne

Citation

Fortmeier, O, Bücker, H M, Fagginger Auer, B O & Bisseling, R H 2013, 'A new metric enabling an exact hypergraph model for the communication volume in distributed-memory parallel applications', Parallel Computing, vol. 39, no. 8, pp. 319-335. https://doi.org/10.1016/j.parco.2013.05.003