Geometric Deep Learning using Vascular Surface Meshes for Modality-Independent Unruptured Intracranial Aneurysm Detection

Publication date

2023-11

Authors

Timmins, K M
van der Schaaf, Irene CISNI 0000000390429582
Vos, Iris
Ruigrok, Ynte M.ORCID 0000-0002-5396-2989ISNI 0000000389818257
Velthuis, BirgittaORCID 0000-0002-2542-9474ISNI 0000000395231874
Kuijf, Hugo J.ORCID 0000-0001-6997-9059ISNI 0000000393308567

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Advisors

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Document Type

Article

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License

taverne

Abstract

Early detection of unruptured intracranial aneurysms (UIAs) enables better rupture risk and preventative treatment assessment. UIAs are usually diagnosed on Time-of-Flight Magnetic Resonance Angiographs (TOF-MRA) or contrast-enhanced Computed Tomography Angiographs (CTA). Various automatic voxel-based deep learning UIA detection methods have been developed, but these are limited to a single modality. We propose a modality-independent UIA detection method using a geometric deep learning model with high resolution surface meshes of brain vessels. A mesh convolutional neural network with ResU-Net style architecture was used. UIA detection performance was investigated with different input and pooling mesh resolutions, and including additional edge input features (shape index and curvedness). Both a higher resolution mesh (15,000 edges) and additional curvature edge features improved performance (average sensitivity: 65.6%, false positive count/image (FPC/image): 1.61). UIAs were detected in an independent TOF-MRA test set and a CTA test set with average sensitivity of 52.0% and 48.3% and average FPC/image of 1.04 and 1.05 respectively. We provide modality-independent UIA detection using a deep-learning vascular surface mesh model with comparable performance to state-of-the-art UIA detection methods.

Keywords

Aneurysms, angiography, detection, geometric deep learning, meshes, Taverne, Software, Radiological and Ultrasound Technology, Electrical and Electronic Engineering, Computer Science Applications

Citation

Timmins, K M, Van der Schaaf, I C, Vos, I N, Ruigrok, Y M, Velthuis, B K & Kuijf, H J 2023, 'Geometric Deep Learning using Vascular Surface Meshes for Modality-Independent Unruptured Intracranial Aneurysm Detection', IEEE transactions on medical imaging, vol. 42, no. 11, pp. 3451-3460. https://doi.org/10.1109/TMI.2023.3288746